Package: renz 0.2.1
renz: R-Enzymology
Contains utilities for the analysis of Michaelian kinetic data. Beside the classical linearization methods (Lineweaver-Burk, Eadie-Hofstee, Hanes-Woolf and Eisenthal-Cornish-Bowden), features include the ability to carry out weighted regression analysis that, in most cases, substantially improves the estimation of kinetic parameters (Aledo (2021) <doi:10.1002/bmb.21522>). To avoid data transformation and the potential biases introduced by them, the package also offers functions to directly fitting data to the Michaelis-Menten equation, either using ([S], v) or (time, [S]) data. Utilities to simulate substrate progress-curves (making use of the Lambert W function) are also provided. The package is accompanied of vignettes that aim to orientate the user in the choice of the most suitable method to estimate the kinetic parameter of an Michaelian enzyme.
Authors:
renz_0.2.1.tar.gz
renz_0.2.1.zip(r-4.5)renz_0.2.1.zip(r-4.4)renz_0.2.1.zip(r-4.3)
renz_0.2.1.tgz(r-4.4-any)renz_0.2.1.tgz(r-4.3-any)
renz_0.2.1.tar.gz(r-4.5-noble)renz_0.2.1.tar.gz(r-4.4-noble)
renz_0.2.1.tgz(r-4.4-emscripten)renz_0.2.1.tgz(r-4.3-emscripten)
renz.pdf |renz.html✨
renz/json (API)
NEWS
| # Install 'renz' in R: |
| install.packages('renz', repos = c('https://jcaledo.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 12 months agofrom:baea88b5b1. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 22 2024 |
| R-4.5-win | OK | Nov 22 2024 |
| R-4.5-linux | OK | Nov 22 2024 |
| R-4.4-win | OK | Nov 22 2024 |
| R-4.4-mac | OK | Nov 22 2024 |
| R-4.3-win | OK | Nov 22 2024 |
| R-4.3-mac | OK | Nov 22 2024 |
Exports:bibidir.MMecbehfE.progresshwint.MMlbsE.progress
Dependencies:VGAM
Enzyme Kinetic Parameters
Rendered fromKm_Vm.Rmdusingknitr::rmarkdownon Nov 22 2024.Last update: 2021-12-02
Started: 2021-12-02
Fitting the Michaelis-Menten Model
Rendered fromdirMM.Rmdusingknitr::rmarkdownon Nov 22 2024.Last update: 2023-11-28
Started: 2021-12-02
Integrated Michaelis-Menten Equation
Rendered fromintMM.Rmdusingknitr::rmarkdownon Nov 22 2024.Last update: 2021-12-02
Started: 2021-12-02
Linearized Michaelis-Menten Equations
Rendered fromLinearized_MM.Rmdusingknitr::rmarkdownon Nov 22 2024.Last update: 2021-12-02
Started: 2021-12-02
Michaelis-Menten and the Lambert W function
Rendered fromLambert.Rmdusingknitr::rmarkdownon Nov 22 2024.Last update: 2023-11-28
Started: 2021-12-02
